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[WIP] RL-RBF-G Transfer Operator #245

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d084c13
Initial commit, please don't review this will give you depression
AbdAlazezAhmed Mar 27, 2026
9d7810e
allow for not rescaling as typeparam
AbdAlazezAhmed Mar 27, 2026
97b15a0
initial geoidesic thresholding impl
AbdAlazezAhmed Mar 28, 2026
a7ae06e
use dispatches
AbdAlazezAhmed Mar 29, 2026
32553da
uncomment tests
AbdAlazezAhmed Mar 30, 2026
e4a9a30
better performance
AbdAlazezAhmed Mar 30, 2026
c9ed28b
refer to Thunderbolt dir in docs
AbdAlazezAhmed Mar 30, 2026
575f8a9
path*
AbdAlazezAhmed Mar 30, 2026
6639303
formatter
AbdAlazezAhmed Mar 30, 2026
3a8b185
parent dir
AbdAlazezAhmed Mar 30, 2026
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6 changes: 5 additions & 1 deletion Project.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,14 @@ FastBroadcast = "7034ab61-46d4-4ed7-9d0f-46aef9175898"
Ferrite = "c061ca5d-56c9-439f-9c0e-210fe06d3992"
FerriteGmsh = "4f95f4f8-b27c-4ae5-9a39-ea55e634e36b"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
Graphs = "86223c79-3864-5bf0-83f7-82e725a168b6"
JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
KernelAbstractions = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
LinearSolve = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
Logging = "56ddb016-857b-54e1-b83d-db4d58db5568"
ModelingToolkit = "961ee093-0014-501f-94e3-6117800e7a78"
NearestNeighbors = "b8a86587-4115-5ab1-83bc-aa920d37bbce"
OrderedCollections = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
OrdinaryDiffEqCore = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
OrdinaryDiffEqOperatorSplitting = "760fc936-9fa0-4281-9c1a-468957eedc89"
Expand All @@ -40,8 +42,8 @@ CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
GPUArrays = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7"

[extensions]
ThunderboltGPUArraysExt = "GPUArrays"
CuThunderboltExt = ["CUDA", "GPUArrays"]
ThunderboltGPUArraysExt = "GPUArrays"

[compat]
Aqua = "0.8"
Expand All @@ -52,12 +54,14 @@ FastBroadcast = "0.3.5"
Ferrite = "=1.2"
ForwardDiff = "0.10.38"
GPUArrays = "11.4.0"
Graphs = "1.14.0"
JET = "0.9, 0.10"
KernelAbstractions = "0.9.34"
LinearSolve = "3"
Logging = "1.10"
MatrixDepot = "1.0.13"
ModelingToolkit = "10"
NearestNeighbors = "0.4.27"
OrdinaryDiffEqCore = "1"
OrdinaryDiffEqLowOrderRK = "1"
OrdinaryDiffEqNonlinearSolve = "1.15.0"
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3 changes: 3 additions & 0 deletions docs/Project.toml
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@termi-official termi-official Mar 30, 2026

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Manifest needs a manual update.

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@AbdAlazezAhmed AbdAlazezAhmed Mar 30, 2026

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Can we remove it?

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@termi-official termi-official Mar 30, 2026

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No, we want this to be precisely reproducibe. Not fixing the Manifest can yield to random doc build failures.

Original file line number Diff line number Diff line change
Expand Up @@ -17,3 +17,6 @@ StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
SymbolicIndexingInterface = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
Thunderbolt = "909927c2-98d5-4a67-bba9-79f03a9ad49b"
TimerOutputs = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f"

[sources]
Thunderbolt = {path = ".."}
4 changes: 4 additions & 0 deletions src/Thunderbolt.jl
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Expand Up @@ -14,6 +14,10 @@ import Polyester: @batch
using SparseMatricesCSR, LinearAlgebra
using OrderedCollections: OrderedDict, OrderedSet
using BlockArrays, SparseArrays, StaticArrays
using NearestNeighbors
import Graphs: SimpleGraph, dijkstra_shortest_paths, add_edge!
import Graphs.Parallel
import Graphs.vertices as GraphsVertices

using JLD2: jldopen
import WriteVTK
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